Incidental Mutation 'R6560:Glb1l3'
ID 522020
Institutional Source Beutler Lab
Gene Symbol Glb1l3
Ensembl Gene ENSMUSG00000031966
Gene Name galactosidase, beta 1 like 3
Synonyms 4921509F24Rik
MMRRC Submission 044684-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.069) question?
Stock # R6560 (G1)
Quality Score 225.009
Status Not validated
Chromosome 9
Chromosomal Location 26729249-26772186 bp(-) (GRCm39)
Type of Mutation splice site
DNA Base Change (assembly) C to T at 26739720 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000147979 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000034448] [ENSMUST00000210274]
AlphaFold no structure available at present
Predicted Effect probably null
Transcript: ENSMUST00000034448
SMART Domains Protein: ENSMUSP00000034448
Gene: ENSMUSG00000031966

DomainStartEndE-ValueType
Pfam:Glyco_hydro_35 1 304 1.5e-110 PFAM
Pfam:Glyco_hydro_42 7 160 6.2e-11 PFAM
low complexity region 309 318 N/A INTRINSIC
Predicted Effect noncoding transcript
Transcript: ENSMUST00000209592
Predicted Effect probably null
Transcript: ENSMUST00000210274
Predicted Effect noncoding transcript
Transcript: ENSMUST00000211353
Coding Region Coverage
  • 1x: 100.0%
  • 3x: 99.9%
  • 10x: 99.3%
  • 20x: 97.8%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 36 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Abca7 T A 10: 79,843,230 (GRCm39) L1235Q probably damaging Het
Acin1 T C 14: 54,916,290 (GRCm39) T174A probably benign Het
Adamtsl1 G A 4: 86,255,130 (GRCm39) R733H probably damaging Het
Akr1b1 C T 6: 34,286,939 (GRCm39) V206M possibly damaging Het
Arsk A T 13: 76,223,105 (GRCm39) I164N probably benign Het
Bbs5 T A 2: 69,487,300 (GRCm39) N194K probably damaging Het
Bicra T C 7: 15,723,119 (GRCm39) T133A possibly damaging Het
Card6 G A 15: 5,128,367 (GRCm39) P1010S probably damaging Het
Ccdc18 T A 5: 108,339,790 (GRCm39) N778K probably benign Het
Cept1 T C 3: 106,412,594 (GRCm39) I240V possibly damaging Het
Crip3 A G 17: 46,741,962 (GRCm39) R150G probably damaging Het
Cyp2c50 A G 19: 40,085,299 (GRCm39) T320A probably benign Het
Dio2 G C 12: 90,696,607 (GRCm39) S127* probably null Het
Dnai3 T C 3: 145,801,161 (GRCm39) E99G possibly damaging Het
Dscam T C 16: 96,626,935 (GRCm39) S325G probably benign Het
Exosc4 A G 15: 76,211,813 (GRCm39) I41V probably benign Het
Gm10801 C CGTG 2: 98,494,152 (GRCm39) probably null Het
Gm3072 T A 14: 41,345,510 (GRCm39) D89V unknown Het
Gosr2 T C 11: 103,577,508 (GRCm39) H79R probably damaging Het
Has2 T A 15: 56,531,660 (GRCm39) T352S probably damaging Het
Insig1 T A 5: 28,276,531 (GRCm39) C32* probably null Het
Klf9 A G 19: 23,119,314 (GRCm39) S66G probably damaging Het
Mfn1 T C 3: 32,623,665 (GRCm39) I263T probably damaging Het
Myl2 G A 5: 122,240,834 (GRCm39) G38R probably null Het
Negr1 A G 3: 157,018,494 (GRCm39) T332A probably benign Het
Neo1 A G 9: 58,787,884 (GRCm39) S1417P possibly damaging Het
Or52ab4 T C 7: 102,987,945 (GRCm39) F228S probably benign Het
Or7e168 G A 9: 19,720,412 (GRCm39) S266N probably benign Het
Pcgf3 C A 5: 108,621,768 (GRCm39) H35Q probably damaging Het
Plppr5 A G 3: 117,465,639 (GRCm39) I297V probably benign Het
Plxna4 C T 6: 32,192,613 (GRCm39) V783M probably damaging Het
Prx A T 7: 27,214,746 (GRCm39) Q85H probably damaging Het
Tex14 T G 11: 87,388,688 (GRCm39) M305R possibly damaging Het
Ythdc1 T C 5: 86,964,467 (GRCm39) V92A probably benign Het
Zfp619 G A 7: 39,186,954 (GRCm39) E995K probably damaging Het
Zfp90 A G 8: 107,142,379 (GRCm39) R4G probably damaging Het
Other mutations in Glb1l3
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00234:Glb1l3 APN 9 26,764,967 (GRCm39) missense probably damaging 1.00
IGL00537:Glb1l3 APN 9 26,740,346 (GRCm39) missense probably damaging 1.00
IGL01139:Glb1l3 APN 9 26,729,523 (GRCm39) missense probably benign 0.00
IGL01397:Glb1l3 APN 9 26,736,491 (GRCm39) missense probably benign
IGL01603:Glb1l3 APN 9 26,770,832 (GRCm39) missense probably damaging 1.00
IGL01938:Glb1l3 APN 9 26,729,825 (GRCm39) missense probably damaging 0.98
IGL02051:Glb1l3 APN 9 26,736,464 (GRCm39) missense probably benign 0.39
IGL02105:Glb1l3 APN 9 26,729,823 (GRCm39) missense probably damaging 0.99
IGL02132:Glb1l3 APN 9 26,736,466 (GRCm39) missense probably benign 0.07
IGL02249:Glb1l3 APN 9 26,742,564 (GRCm39) missense possibly damaging 0.60
IGL02363:Glb1l3 APN 9 26,764,940 (GRCm39) missense probably damaging 1.00
IGL02824:Glb1l3 APN 9 26,761,405 (GRCm39) missense probably damaging 1.00
IGL02938:Glb1l3 APN 9 26,738,055 (GRCm39) missense probably benign 0.26
IGL03181:Glb1l3 APN 9 26,739,659 (GRCm39) splice site probably null
IGL03288:Glb1l3 APN 9 26,729,601 (GRCm39) missense probably damaging 0.99
IGL03299:Glb1l3 APN 9 26,770,748 (GRCm39) missense probably damaging 1.00
R0479:Glb1l3 UTSW 9 26,740,389 (GRCm39) missense probably benign 0.31
R4036:Glb1l3 UTSW 9 26,740,343 (GRCm39) missense probably damaging 1.00
R4037:Glb1l3 UTSW 9 26,740,343 (GRCm39) missense probably damaging 1.00
R4038:Glb1l3 UTSW 9 26,740,343 (GRCm39) missense probably damaging 1.00
R4039:Glb1l3 UTSW 9 26,740,343 (GRCm39) missense probably damaging 1.00
R4797:Glb1l3 UTSW 9 26,739,742 (GRCm39) missense probably damaging 0.96
R4840:Glb1l3 UTSW 9 26,740,349 (GRCm39) missense probably benign 0.06
R5645:Glb1l3 UTSW 9 26,736,122 (GRCm39) missense probably benign
R5907:Glb1l3 UTSW 9 26,737,679 (GRCm39) missense probably damaging 1.00
R5916:Glb1l3 UTSW 9 26,766,032 (GRCm39) missense probably benign 0.20
R6428:Glb1l3 UTSW 9 26,770,748 (GRCm39) missense probably damaging 1.00
R6489:Glb1l3 UTSW 9 26,738,127 (GRCm39) missense probably benign 0.31
R6532:Glb1l3 UTSW 9 26,729,738 (GRCm39) missense probably benign 0.02
R6653:Glb1l3 UTSW 9 26,770,884 (GRCm39) missense probably benign 0.09
R6802:Glb1l3 UTSW 9 26,770,648 (GRCm39) splice site probably null
R7347:Glb1l3 UTSW 9 26,740,299 (GRCm39) missense probably benign
R7531:Glb1l3 UTSW 9 26,764,950 (GRCm39) missense possibly damaging 0.62
R7542:Glb1l3 UTSW 9 26,729,491 (GRCm39) missense possibly damaging 0.70
R7725:Glb1l3 UTSW 9 26,739,659 (GRCm39) splice site probably null
R8998:Glb1l3 UTSW 9 26,764,914 (GRCm39) critical splice donor site probably null
R8999:Glb1l3 UTSW 9 26,764,914 (GRCm39) critical splice donor site probably null
R9158:Glb1l3 UTSW 9 26,765,005 (GRCm39) nonsense probably null
R9464:Glb1l3 UTSW 9 26,761,351 (GRCm39) missense probably damaging 1.00
R9536:Glb1l3 UTSW 9 26,770,929 (GRCm39) missense probably benign 0.01
Z1177:Glb1l3 UTSW 9 26,729,541 (GRCm39) missense probably damaging 1.00
Predicted Primers PCR Primer
(F):5'- CACACCTTGTTCTCGAGAGC -3'
(R):5'- CCAGATAGAATTTGGGGAAGGTTTC -3'

Sequencing Primer
(F):5'- GTTCTCGAGAGCTTCACAAGATGC -3'
(R):5'- AAGGTTTCCAGGTTGCCATTTAC -3'
Posted On 2018-06-06