Mutagenetix > Incidental Mutation

Incidental Mutation 'R5212:Tmprss2'

403211

Institutional Source

Beutler Lab

Gene Symbol

Tmprss2

Ensembl Gene

ENSMUSG00000000385

Gene Name

transmembrane protease, serine 2

Synonyms

D16Ertd61e, epitheliasin

MMRRC Submission

042786-MU

Accession Numbers

Essential gene?

Non essential (E-score: 0.000) question?

Stock #

R5212 (G1)

Quality Score

225

Status

Validated

Chromosome

Chromosomal Location

97365882-97412395 bp(-) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

G to T at 97377492 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Glutamine to Lysine at position 202 (Q202K)

Ref Sequence

ENSEMBL: ENSMUSP00000000395 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000000395] [ENSMUST00000231544]

AlphaFold

Q9JIQ8

Predicted Effect

probably benign
Transcript: ENSMUST00000000395
AA Change: Q202K

PolyPhen 2 Score 0.005 (Sensitivity: 0.97; Specificity: 0.74)

SMART Domains

Protein: ENSMUSP00000000395
Gene: ENSMUSG00000000385
AA Change: Q202K

Domain	Start	End	E-Value	Type
transmembrane domain	86	108	N/A	INTRINSIC
LDLa	111	149	1e-9	SMART
SR	148	241	8.55e-10	SMART
Tryp_SPc	253	482	4.58e-92	SMART

Predicted Effect

probably benign
Transcript: ENSMUST00000231544

Predicted Effect

noncoding transcript
Transcript: ENSMUST00000231908

Meta Mutation Damage Score

0.0898

Coding Region Coverage

1x: 99.3%
3x: 98.7%
10x: 97.5%
20x: 95.7%

Validation Efficiency

97% (58/60)

MGI Phenotype

FUNCTION: [Summary is not available for the mouse gene. This summary is for the human ortholog.] This gene encodes a protein that belongs to the serine protease family. The encoded protein contains a type II transmembrane domain, a receptor class A domain, a scavenger receptor cysteine-rich domain and a protease domain. Serine proteases are known to be involved in many physiological and pathological processes. This gene was demonstrated to be up-regulated by androgenic hormones in prostate cancer cells and down-regulated in androgen-independent prostate cancer tissue. The protease domain of this protein is thought to be cleaved and secreted into cell media after autocleavage. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Sep 2008]
PHENOTYPE: Mice homozygous for a disruption in this gene appear normal. [provided by MGI curators]

Allele List at MGI

Other mutations in this stock

Total: 55 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1110002E22Rik	T	A	3: 137,771,611 (GRCm39)	S267T	possibly damaging	Het
Abca9	T	C	11: 109,998,052 (GRCm39)	D1514G	probably benign	Het
Adamtsl4	T	A	3: 95,584,980 (GRCm39)	D896V	probably damaging	Het
Amer2	A	G	14: 60,617,269 (GRCm39)	Y362C	probably damaging	Het
Arglu1	T	A	8: 8,733,843 (GRCm39)	R158W	probably damaging	Het
Arhgef7	A	G	8: 11,778,388 (GRCm39)	E46G	probably benign	Het
Atg2b	A	G	12: 105,613,055 (GRCm39)	V1172A	probably benign	Het
Bhlhe23	T	A	2: 180,417,886 (GRCm39)	K217N	probably damaging	Het
Birc6	A	C	17: 74,977,369 (GRCm39)	N4388T	probably damaging	Het
Ccp110	C	T	7: 118,328,919 (GRCm39)	A845V	probably damaging	Het
Cd63	A	G	10: 128,747,722 (GRCm39)	Y105C	probably damaging	Het
Cdk11b	T	C	4: 155,723,072 (GRCm39)		probably null	Het
Clip1	T	A	5: 123,768,744 (GRCm39)	R618S	probably benign	Het
Crybg1	A	T	10: 43,843,739 (GRCm39)	F1731L	possibly damaging	Het
Dock1	A	C	7: 134,390,923 (GRCm39)	K728Q	possibly damaging	Het
Emc2	A	G	15: 43,374,240 (GRCm39)	E180G	probably damaging	Het
F13b	A	T	1: 139,440,725 (GRCm39)	I394F	probably benign	Het
Fnta	A	G	8: 26,499,735 (GRCm39)	I155T	probably benign	Het
Fshr	T	A	17: 89,293,685 (GRCm39)	E331V	probably benign	Het
Fshr	T	A	17: 89,293,684 (GRCm39)	E331D	probably benign	Het
Gas2l1	A	T	11: 5,011,108 (GRCm39)	C574S	probably benign	Het
Ggnbp2	T	A	11: 84,744,847 (GRCm39)		probably benign	Het
Gm3371	A	C	14: 44,641,111 (GRCm39)		probably benign	Het
Gm7489	T	A	15: 53,749,016 (GRCm39)		probably benign	Het
Hand1	A	C	11: 57,722,273 (GRCm39)	F114V	probably damaging	Het
Itga4	A	C	2: 79,110,939 (GRCm39)	H259P	probably damaging	Het
Jakmip1	A	T	5: 37,262,245 (GRCm39)	H183L	probably benign	Het
Kifbp	A	T	10: 62,398,908 (GRCm39)		probably benign	Het
Krt8	G	T	15: 101,906,402 (GRCm39)	A369D	possibly damaging	Het
Krt82	T	C	15: 101,453,484 (GRCm39)	S301G	probably damaging	Het
Lig3	A	G	11: 82,678,504 (GRCm39)	T248A	probably benign	Het
Madcam1	C	G	10: 79,504,179 (GRCm39)	T255S	probably benign	Het
Med20	T	C	17: 47,929,775 (GRCm39)	Y71H	probably benign	Het
Mtss2	A	G	8: 111,455,850 (GRCm39)	I107V	probably damaging	Het
Nans	T	C	4: 46,502,547 (GRCm39)	F328S	possibly damaging	Het
Ncbp3	A	G	11: 72,944,373 (GRCm39)		probably benign	Het
Nek8	T	C	11: 78,063,342 (GRCm39)	M1V	probably null	Het
Nufip1	A	T	14: 76,370,538 (GRCm39)	N413I	possibly damaging	Het
Pbx3	T	C	2: 34,178,793 (GRCm39)		probably benign	Het
Plppr3	C	T	10: 79,698,279 (GRCm39)	G419R	probably benign	Het
Rfx1	G	T	8: 84,793,221 (GRCm39)		probably benign	Het
Rnpepl1	C	T	1: 92,839,045 (GRCm39)	A68V	probably benign	Het
Rsbn1l	A	T	5: 21,101,212 (GRCm39)	M776K	probably benign	Het
Setd7	A	T	3: 51,450,238 (GRCm39)	Y63N	probably damaging	Het
Slc45a2	C	T	15: 11,027,871 (GRCm39)	T480I	probably damaging	Het
Snap47	T	C	11: 59,319,178 (GRCm39)	E320G	probably damaging	Het
Spaca6	C	A	17: 18,058,656 (GRCm39)	P68Q	probably benign	Het
Tdrd3	G	C	14: 87,743,651 (GRCm39)	R527P	probably damaging	Het
Tmprss6	A	G	15: 78,330,460 (GRCm39)	V69A	probably damaging	Het
Trav6-1	A	T	14: 52,876,161 (GRCm39)	Q27L	probably benign	Het
Ttn	C	T	2: 76,731,957 (GRCm39)		probably benign	Het
Ttn	T	C	2: 76,619,945 (GRCm39)	I15908V	probably benign	Het
Ttn	T	A	2: 76,628,019 (GRCm39)	D12931V	probably damaging	Het
Ush2a	T	A	1: 188,176,902 (GRCm39)		probably null	Het
Wls	A	G	3: 159,578,645 (GRCm39)	N69S	probably benign	Het

Other mutations in Tmprss2

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL01935:Tmprss2	APN	16	97,379,795 (GRCm39)	nonsense	probably null
IGL02130:Tmprss2	APN	16	97,392,089 (GRCm39)	missense	probably damaging	1.00
IGL02149:Tmprss2	APN	16	97,400,479 (GRCm39)	utr 5 prime	probably benign
IGL03080:Tmprss2	APN	16	97,398,044 (GRCm39)	missense	probably damaging	0.98
PIT4480001:Tmprss2	UTSW	16	97,400,460 (GRCm39)	missense	possibly damaging	0.77
R0395:Tmprss2	UTSW	16	97,368,245 (GRCm39)	missense	probably damaging	1.00
R0485:Tmprss2	UTSW	16	97,373,194 (GRCm39)	unclassified	probably benign
R1055:Tmprss2	UTSW	16	97,377,462 (GRCm39)	missense	probably damaging	1.00
R1080:Tmprss2	UTSW	16	97,392,698 (GRCm39)	missense	probably benign
R1405:Tmprss2	UTSW	16	97,398,005 (GRCm39)	missense	probably benign	0.00
R1405:Tmprss2	UTSW	16	97,398,005 (GRCm39)	missense	probably benign	0.00
R1930:Tmprss2	UTSW	16	97,370,262 (GRCm39)	missense	probably benign	0.17
R1931:Tmprss2	UTSW	16	97,370,262 (GRCm39)	missense	probably benign	0.17
R1955:Tmprss2	UTSW	16	97,368,377 (GRCm39)	critical splice acceptor site	probably null
R2443:Tmprss2	UTSW	16	97,369,703 (GRCm39)	missense	possibly damaging	0.65
R3825:Tmprss2	UTSW	16	97,398,021 (GRCm39)	missense	probably damaging	1.00
R4508:Tmprss2	UTSW	16	97,371,627 (GRCm39)	missense	probably damaging	1.00
R5571:Tmprss2	UTSW	16	97,392,071 (GRCm39)	missense	probably null	1.00
R5715:Tmprss2	UTSW	16	97,370,183 (GRCm39)	missense	possibly damaging	0.65
R6816:Tmprss2	UTSW	16	97,369,667 (GRCm39)	missense	possibly damaging	0.94
R6921:Tmprss2	UTSW	16	97,369,637 (GRCm39)	missense	probably damaging	0.98
R7230:Tmprss2	UTSW	16	97,379,797 (GRCm39)	missense	probably benign	0.02
R7311:Tmprss2	UTSW	16	97,369,616 (GRCm39)	missense	possibly damaging	0.94
R7788:Tmprss2	UTSW	16	97,377,429 (GRCm39)	nonsense	probably null
R8052:Tmprss2	UTSW	16	97,369,616 (GRCm39)	missense	probably damaging	1.00
R8329:Tmprss2	UTSW	16	97,369,665 (GRCm39)	missense	probably benign	0.01
R8511:Tmprss2	UTSW	16	97,369,662 (GRCm39)	missense	possibly damaging	0.94
R9234:Tmprss2	UTSW	16	97,379,821 (GRCm39)	missense	probably damaging	1.00
R9314:Tmprss2	UTSW	16	97,400,459 (GRCm39)	missense	probably benign	0.38
R9456:Tmprss2	UTSW	16	97,392,669 (GRCm39)	missense	probably benign
R9629:Tmprss2	UTSW	16	97,369,702 (GRCm39)	missense	probably benign	0.00
R9680:Tmprss2	UTSW	16	97,379,826 (GRCm39)	missense	probably damaging	1.00
Z1176:Tmprss2	UTSW	16	97,368,257 (GRCm39)	missense	probably damaging	0.98

Predicted Primers

PCR Primer
(F):5'- TGTGAAACACTGCTTACCTCC -3'
(R):5'- CAATGGTTTTCAGACAGCATGG -3'

Sequencing Primer
(F):5'- TTACCTCCACCCAAAACAGTCTAG -3'
(R):5'- CAGACAGCATGGTTGAATTTGGC -3'

Posted On

2016-07-22