Incidental Mutation 'R4769:Vmn1r11'
ID 366327
Institutional Source Beutler Lab
Gene Symbol Vmn1r11
Ensembl Gene ENSMUSG00000115236
Gene Name vomeronasal 1 receptor 11
Synonyms V1rc3
Accession Numbers
Essential gene? Probably non essential (E-score: 0.104) question?
Stock # R4769 (G1)
Quality Score 225
Status Not validated
Chromosome 6
Chromosomal Location 57114338-57115237 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) G to A at 57114597 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Arginine to Lysine at position 87 (R87K)
Ref Sequence ENSEMBL: ENSMUSP00000154588 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000071304] [ENSMUST00000176954] [ENSMUST00000226968] [ENSMUST00000228235]
AlphaFold Q3SXA2
Predicted Effect probably damaging
Transcript: ENSMUST00000071304
AA Change: R87K

PolyPhen 2 Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
SMART Domains Protein: ENSMUSP00000071272
Gene: ENSMUSG00000115236
AA Change: R87K

DomainStartEndE-ValueType
Pfam:V1R 28 293 4.5e-56 PFAM
Predicted Effect probably damaging
Transcript: ENSMUST00000176954
AA Change: R87K

PolyPhen 2 Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
SMART Domains Protein: ENSMUSP00000135192
Gene: ENSMUSG00000093635
AA Change: R87K

DomainStartEndE-ValueType
Pfam:V1R 28 293 9.7e-59 PFAM
Predicted Effect probably damaging
Transcript: ENSMUST00000226968
AA Change: R87K

PolyPhen 2 Score 0.998 (Sensitivity: 0.27; Specificity: 0.99)
Predicted Effect probably damaging
Transcript: ENSMUST00000228235
AA Change: R50K

PolyPhen 2 Score 0.995 (Sensitivity: 0.68; Specificity: 0.97)
Coding Region Coverage
  • 1x: 99.1%
  • 3x: 98.4%
  • 10x: 96.7%
  • 20x: 93.8%
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 50 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
3425401B19Rik A C 14: 32,382,174 (GRCm39) S1264A probably benign Het
Adamts13 T G 2: 26,898,723 (GRCm39) Y1361* probably null Het
Ahrr A T 13: 74,362,331 (GRCm39) D389E probably damaging Het
Alx3 T C 3: 107,508,007 (GRCm39) F172S probably damaging Het
Antxrl A G 14: 33,795,027 (GRCm39) H485R possibly damaging Het
Aox4 A G 1: 58,298,307 (GRCm39) D1091G probably null Het
Btbd1 T A 7: 81,455,558 (GRCm39) Q271L probably benign Het
Cd209c A T 8: 3,994,953 (GRCm39) N70K probably benign Het
Cdc14a C T 3: 116,088,399 (GRCm39) probably null Het
Cenpe A G 3: 134,953,912 (GRCm39) M1641V probably benign Het
Clec2e G A 6: 129,077,790 (GRCm39) T16I probably benign Het
Clp1 T C 2: 84,556,219 (GRCm39) D87G possibly damaging Het
Dpy19l1 A T 9: 24,337,444 (GRCm39) F517I probably damaging Het
Dzip3 T C 16: 48,758,837 (GRCm39) N646S probably damaging Het
Ephx1 T A 1: 180,823,543 (GRCm39) Y188F possibly damaging Het
Etfa A T 9: 55,403,051 (GRCm39) H81Q possibly damaging Het
Gigyf2 T A 1: 87,368,571 (GRCm39) F1084I probably damaging Het
Heatr3 T C 8: 88,868,411 (GRCm39) probably null Het
Ift81 G T 5: 122,732,656 (GRCm39) H293N probably benign Het
Igkv9-120 G T 6: 68,027,351 (GRCm39) R88S possibly damaging Het
Il6 T G 5: 30,223,076 (GRCm39) L114* probably null Het
Ism2 A T 12: 87,346,355 (GRCm39) M42K probably benign Het
Lhx5 A G 5: 120,574,503 (GRCm39) E269G probably benign Het
Marveld1 T G 19: 42,136,434 (GRCm39) M116R possibly damaging Het
Micall2 A G 5: 139,692,641 (GRCm39) S911P probably damaging Het
Mier1 G A 4: 102,997,417 (GRCm39) R195H probably benign Het
Muc2 T A 7: 141,286,260 (GRCm39) probably null Het
Mybbp1a A G 11: 72,336,466 (GRCm39) K486R probably damaging Het
Ncapd2 A C 6: 125,162,708 (GRCm39) L179R probably damaging Het
Nos1 C T 5: 118,081,310 (GRCm39) Q1171* probably null Het
Nrg1 T A 8: 32,408,000 (GRCm39) I78F probably damaging Het
Or5d36 T G 2: 87,901,073 (GRCm39) T218P probably benign Het
Or6y1 T G 1: 174,276,524 (GRCm39) F112V possibly damaging Het
Plek2 C T 12: 78,953,664 (GRCm39) probably null Het
Plod2 A G 9: 92,477,325 (GRCm39) H339R probably damaging Het
Pold1 C T 7: 44,184,495 (GRCm39) C835Y probably damaging Het
Polr1a A G 6: 71,927,852 (GRCm39) I868V probably benign Het
Prss54 C A 8: 96,286,003 (GRCm39) V357L probably benign Het
Rbbp8 T A 18: 11,855,727 (GRCm39) S625T probably damaging Het
Rgs1 A T 1: 144,123,667 (GRCm39) L86Q probably damaging Het
Ripk4 T A 16: 97,545,262 (GRCm39) N462Y probably damaging Het
Rsf1 C T 7: 97,325,429 (GRCm39) L1011F probably damaging Het
Slc19a3 G A 1: 82,997,062 (GRCm39) T382I probably damaging Het
Slc9a2 G A 1: 40,765,534 (GRCm39) R308Q probably damaging Het
Top2b T A 14: 16,398,991 (GRCm38) L537Q probably damaging Het
Trim45 C A 3: 100,839,050 (GRCm39) probably benign Het
Umodl1 G T 17: 31,202,976 (GRCm39) R443M possibly damaging Het
Vmn1r78 T A 7: 11,886,725 (GRCm39) I112N probably damaging Het
Zeb2 T G 2: 44,886,447 (GRCm39) E825A probably damaging Het
Zfp930 A T 8: 69,679,344 (GRCm39) I50F probably benign Het
Other mutations in Vmn1r11
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02134:Vmn1r11 APN 6 57,115,022 (GRCm39) missense possibly damaging 0.66
IGL02141:Vmn1r11 APN 6 57,114,364 (GRCm39) nonsense probably null
IGL03147:Vmn1r11 UTSW 6 57,114,650 (GRCm39) missense probably damaging 0.98
R0908:Vmn1r11 UTSW 6 57,115,049 (GRCm39) missense probably damaging 1.00
R1185:Vmn1r11 UTSW 6 57,114,492 (GRCm39) missense possibly damaging 0.89
R1185:Vmn1r11 UTSW 6 57,114,492 (GRCm39) missense possibly damaging 0.89
R1185:Vmn1r11 UTSW 6 57,114,492 (GRCm39) missense possibly damaging 0.89
R1347:Vmn1r11 UTSW 6 57,114,963 (GRCm39) missense probably benign 0.23
R1347:Vmn1r11 UTSW 6 57,114,963 (GRCm39) missense probably benign 0.23
R1348:Vmn1r11 UTSW 6 57,114,963 (GRCm39) missense probably benign 0.23
R1349:Vmn1r11 UTSW 6 57,114,963 (GRCm39) missense probably benign 0.23
R1373:Vmn1r11 UTSW 6 57,114,963 (GRCm39) missense probably benign 0.23
R1497:Vmn1r11 UTSW 6 57,114,394 (GRCm39) missense probably damaging 1.00
R2147:Vmn1r11 UTSW 6 57,114,583 (GRCm39) missense probably benign 0.29
R2367:Vmn1r11 UTSW 6 57,114,416 (GRCm39) missense probably benign 0.00
R3087:Vmn1r11 UTSW 6 57,114,691 (GRCm39) missense possibly damaging 0.94
R4445:Vmn1r11 UTSW 6 57,114,515 (GRCm39) missense probably benign 0.31
R4667:Vmn1r11 UTSW 6 57,114,483 (GRCm39) missense probably damaging 1.00
R5513:Vmn1r11 UTSW 6 57,114,617 (GRCm39) missense probably damaging 0.97
R5841:Vmn1r11 UTSW 6 57,114,787 (GRCm39) missense probably damaging 1.00
R6089:Vmn1r11 UTSW 6 57,114,645 (GRCm39) missense possibly damaging 0.95
R7155:Vmn1r11 UTSW 6 57,115,147 (GRCm39) missense probably benign 0.07
R7359:Vmn1r11 UTSW 6 57,115,184 (GRCm39) missense probably damaging 1.00
R8846:Vmn1r11 UTSW 6 57,114,807 (GRCm39) missense probably benign 0.19
R9222:Vmn1r11 UTSW 6 57,114,992 (GRCm39) missense possibly damaging 0.94
R9300:Vmn1r11 UTSW 6 57,114,872 (GRCm39) missense probably benign 0.00
R9517:Vmn1r11 UTSW 6 57,114,555 (GRCm39) missense possibly damaging 0.88
Predicted Primers PCR Primer
(F):5'- AAGCTGGGTTAGGAGTCCTAG -3'
(R):5'- GCACCAACATAGAAGATCAGGTTAC -3'

Sequencing Primer
(F):5'- AGGAGTCCTAGCTAATATGTGTCTTC -3'
(R):5'- AAGATCAGGTTACTACTGAAGGAC -3'
Posted On 2015-12-21