Mutagenetix > Incidental Mutation

Incidental Mutation 'R0361:Or2y17'

30123

Institutional Source

Beutler Lab

Gene Symbol

Or2y17

Ensembl Gene

ENSMUSG00000045421

Gene Name

olfactory receptor family 2 subfamily Y member 17

Synonyms

GA_x6K02T2QP88-6094111-6093176, MOR256-2, Olfr1390

MMRRC Submission

038567-MU

Accession Numbers

Essential gene?

Probably non essential (E-score: 0.077) question?

Stock #

R0361 (G1)

Quality Score

225

Status

Not validated

Chromosome

Chromosomal Location

49231361-49232296 bp(+) (GRCm39)

Type of Mutation

missense

DNA Base Change (assembly)

A to T at 49231641 bp (GRCm39)

Zygosity

Heterozygous

Amino Acid Change

Tyrosine to Phenylalanine at position 94 (Y94F)

Ref Sequence

ENSEMBL: ENSMUSP00000151059 (fasta)

Gene Model

predicted gene model for transcript(s): [ENSMUST00000062719] [ENSMUST00000215014]

AlphaFold

Q8VGW9

Predicted Effect

probably benign
Transcript: ENSMUST00000062719
AA Change: Y94F

PolyPhen 2 Score 0.066 (Sensitivity: 0.94; Specificity: 0.84)

SMART Domains

Protein: ENSMUSP00000053611
Gene: ENSMUSG00000045421
AA Change: Y94F

Domain	Start	End	E-Value	Type
Pfam:7tm_4	31	307	2.5e-45	PFAM
Pfam:7TM_GPCR_Srsx	35	230	2.8e-6	PFAM
Pfam:7tm_1	41	289	2.3e-24	PFAM

Predicted Effect

probably benign
Transcript: ENSMUST00000215014
AA Change: Y94F

PolyPhen 2 Score 0.066 (Sensitivity: 0.94; Specificity: 0.84)

Meta Mutation Damage Score

0.0898

Coding Region Coverage

1x: 99.1%
3x: 98.2%
10x: 96.0%
20x: 91.7%

Validation Efficiency

100% (1/1)

MGI Phenotype

FUNCTION: Olfactory receptors interact with odorant molecules in the nose, to initiate a neuronal response that triggers the perception of a smell. The olfactory receptor proteins are members of a large family of G-protein-coupled receptors (GPCR) arising from single coding-exon genes. Olfactory receptors share a 7-transmembrane domain structure with many neurotransmitter and hormone receptors and are responsible for the recognition and G protein-mediated transduction of odorant signals. The olfactory receptor gene family is the largest in the genome. The nomenclature assigned to the olfactory receptor genes and proteins for this organism is independent of other organisms. [provided by RefSeq, Jul 2008]

Allele List at MGI

Other mutations in this stock

Total: 77 list
Gene	Ref	Var	Chr/Loc	Mutation	Predicted Effect	Zygosity
1700006A11Rik	T	G	3: 124,207,283 (GRCm39)	T303P	possibly damaging	Het
1700010I14Rik	G	T	17: 9,211,378 (GRCm39)	V176L	probably benign	Het
1700034J05Rik	T	C	6: 146,853,869 (GRCm39)	T262A	possibly damaging	Het
Adgrl3	A	T	5: 81,908,544 (GRCm39)	I1165F	probably damaging	Het
Ankhd1	T	C	18: 36,780,267 (GRCm39)	I1773T	probably damaging	Het
Api5	A	T	2: 94,253,842 (GRCm39)	L287*	probably null	Het
Apol10b	A	T	15: 77,469,586 (GRCm39)	M197K	possibly damaging	Het
Bcl2	G	A	1: 106,640,424 (GRCm39)	R63W	probably damaging	Het
Cacna1h	A	G	17: 25,608,396 (GRCm39)	M731T	probably damaging	Het
Cav1	C	A	6: 17,339,352 (GRCm39)	R146S	possibly damaging	Het
Cdhr2	A	T	13: 54,881,820 (GRCm39)	I1118F	probably damaging	Het
Cdk7	A	T	13: 100,848,062 (GRCm39)	Y153*	probably null	Het
Cemip	A	G	7: 83,613,218 (GRCm39)	I660T	probably benign	Het
Cfap65	A	T	1: 74,964,599 (GRCm39)	L518Q	probably damaging	Het
Cgas	T	A	9: 78,340,534 (GRCm39)	K399N	probably damaging	Het
Cngb3	A	G	4: 19,366,467 (GRCm39)	H176R	probably benign	Het
Cstdc4	T	C	16: 36,004,648 (GRCm39)	S7P	probably damaging	Het
Cux1	T	A	5: 136,308,351 (GRCm39)	I1263F	probably damaging	Het
Dnajc13	A	G	9: 104,044,258 (GRCm39)	M1867T	probably benign	Het
Dock2	A	G	11: 34,388,327 (GRCm39)	L202P	probably damaging	Het
Dyrk3	A	G	1: 131,057,769 (GRCm39)	S100P	probably benign	Het
Efr3b	A	T	12: 4,027,923 (GRCm39)	S376T	probably benign	Het
Eps8l2	A	C	7: 140,936,112 (GRCm39)	N222T	probably benign	Het
Ermp1	A	T	19: 29,608,806 (GRCm39)	Y158N	probably damaging	Het
Fam13a	A	G	6: 58,964,159 (GRCm39)	V91A	probably benign	Het
Fat3	A	G	9: 15,909,699 (GRCm39)	V2101A	possibly damaging	Het
Fsip2	T	C	2: 82,805,849 (GRCm39)	S723P	possibly damaging	Het
Garem1	G	T	18: 21,432,801 (GRCm39)	C9*	probably null	Het
Gdpd5	A	G	7: 99,107,997 (GRCm39)	I530V	possibly damaging	Het
Gm15217	T	A	14: 46,617,841 (GRCm39)		probably benign	Het
Gm4922	T	C	10: 18,659,289 (GRCm39)	T478A	probably benign	Het
H2-M5	A	G	17: 37,298,328 (GRCm39)	I329T	possibly damaging	Het
Ing4	G	A	6: 125,024,857 (GRCm39)	C200Y	probably damaging	Het
Kcnip1	A	T	11: 33,793,177 (GRCm39)	M5K	probably benign	Het
Kdsr	T	C	1: 106,675,517 (GRCm39)	E102G	probably damaging	Het
Krt15	C	T	11: 100,024,007 (GRCm39)	V346M	probably benign	Het
Lgr6	C	T	1: 134,921,748 (GRCm39)	A199T	probably damaging	Het
Lrrc55	A	T	2: 85,026,589 (GRCm39)	M145K	probably damaging	Het
Lrrtm2	A	G	18: 35,345,985 (GRCm39)	I439T	probably benign	Het
Map2k6	T	C	11: 110,390,335 (GRCm39)	F290L	probably damaging	Het
Me1	T	A	9: 86,533,055 (GRCm39)	I136F	probably damaging	Het
Mfap2	A	G	4: 140,742,294 (GRCm39)	D98G	probably damaging	Het
Mfsd13a	C	T	19: 46,354,943 (GRCm39)	T40I	probably benign	Het
Mst1	T	C	9: 107,962,096 (GRCm39)	F696L	probably damaging	Het
Mta1	A	G	12: 113,096,961 (GRCm39)		probably null	Het
Myh15	A	T	16: 48,934,368 (GRCm39)	N645I	probably benign	Het
Myo7b	T	A	18: 32,147,262 (GRCm39)	I94F	probably damaging	Het
Nefh	A	T	11: 4,890,799 (GRCm39)	S607T	probably benign	Het
Noa1	G	A	5: 77,445,020 (GRCm39)	Q600*	probably null	Het
Nr2f2	A	G	7: 70,007,810 (GRCm39)	V71A	possibly damaging	Het
Oas2	A	T	5: 120,876,466 (GRCm39)	F492L	probably damaging	Het
Olfm3	T	A	3: 114,914,622 (GRCm39)	D211E	probably damaging	Het
Osmr	A	G	15: 6,871,432 (GRCm39)		probably null	Het
Plagl2	A	T	2: 153,073,523 (GRCm39)	D459E	probably benign	Het
Plch2	T	C	4: 155,091,168 (GRCm39)	D148G	possibly damaging	Het
Plxnc1	C	A	10: 94,700,869 (GRCm39)	C605F	probably damaging	Het
Ppm1m	T	C	9: 106,075,325 (GRCm39)	E108G	probably damaging	Het
Prr14l	A	C	5: 32,950,985 (GRCm39)	L1936R	probably damaging	Het
Ralgapa1	A	G	12: 55,723,354 (GRCm39)	I1771T	possibly damaging	Het
Rhobtb2	T	C	14: 70,033,357 (GRCm39)	T538A	probably benign	Het
Rictor	A	G	15: 6,813,588 (GRCm39)	N1025D	possibly damaging	Het
Sec23a	T	G	12: 59,037,804 (GRCm39)	D324A	probably damaging	Het
Srgap1	A	T	10: 121,883,097 (GRCm39)	M1K	probably null	Het
Syne2	T	A	12: 75,965,384 (GRCm39)	F801I	probably benign	Het
Synrg	T	A	11: 83,915,163 (GRCm39)		probably null	Het
Tas2r140	T	G	6: 40,468,232 (GRCm39)	F21V	probably benign	Het
Tmem260	A	T	14: 48,689,504 (GRCm39)	T108S	possibly damaging	Het
Trim2	T	C	3: 84,098,083 (GRCm39)	Y406C	probably damaging	Het
Ttn	T	C	2: 76,673,746 (GRCm39)		probably benign	Het
Vmn1r53	A	T	6: 90,201,064 (GRCm39)	S87T	possibly damaging	Het
Vmn2r115	T	A	17: 23,564,196 (GRCm39)	Y123N	probably benign	Het
Vmn2r28	T	A	7: 5,496,715 (GRCm39)	I46F	probably benign	Het
Zan	T	C	5: 137,395,028 (GRCm39)	T4381A	unknown	Het
Zfp457	A	G	13: 67,440,710 (GRCm39)	F622L	probably damaging	Het
Zfp994	A	T	17: 22,419,091 (GRCm39)	N619K	probably benign	Het
Zfy1	T	C	Y: 726,121 (GRCm39)	H548R	possibly damaging	Het
Zmym4	A	T	4: 126,804,938 (GRCm39)	S441T	probably benign	Het

Other mutations in Or2y17

Allele	Source	Chr	Coord	Type	Predicted Effect	PPH Score
IGL02176:Or2y17	APN	11	49,232,133 (GRCm39)	missense	probably benign	0.44
IGL02334:Or2y17	APN	11	49,232,018 (GRCm39)	missense	probably benign	0.09
IGL02958:Or2y17	APN	11	49,232,127 (GRCm39)	missense	probably benign	0.44
PIT4402001:Or2y17	UTSW	11	49,232,226 (GRCm39)	missense	probably damaging	1.00
R0149:Or2y17	UTSW	11	49,231,641 (GRCm39)	missense	probably benign	0.07
R0417:Or2y17	UTSW	11	49,231,500 (GRCm39)	missense	possibly damaging	0.88
R1187:Or2y17	UTSW	11	49,231,417 (GRCm39)	missense	probably damaging	1.00
R1859:Or2y17	UTSW	11	49,232,211 (GRCm39)	missense	probably damaging	1.00
R1882:Or2y17	UTSW	11	49,231,539 (GRCm39)	missense	probably damaging	1.00
R1885:Or2y17	UTSW	11	49,231,662 (GRCm39)	missense	probably damaging	1.00
R2193:Or2y17	UTSW	11	49,231,770 (GRCm39)	missense	possibly damaging	0.70
R2322:Or2y17	UTSW	11	49,231,476 (GRCm39)	missense	probably damaging	1.00
R3929:Or2y17	UTSW	11	49,231,820 (GRCm39)	missense	probably benign	0.00
R4739:Or2y17	UTSW	11	49,232,148 (GRCm39)	missense	probably benign	0.00
R4939:Or2y17	UTSW	11	49,231,376 (GRCm39)	missense	probably benign	0.00
R5977:Or2y17	UTSW	11	49,231,592 (GRCm39)	missense	probably damaging	0.96
R6338:Or2y17	UTSW	11	49,231,694 (GRCm39)	missense	probably benign	0.30
R6864:Or2y17	UTSW	11	49,231,580 (GRCm39)	missense	probably damaging	0.99
R7045:Or2y17	UTSW	11	49,231,757 (GRCm39)	missense	probably damaging	0.96
R7276:Or2y17	UTSW	11	49,231,821 (GRCm39)	missense	probably benign	0.33
R7339:Or2y17	UTSW	11	49,231,875 (GRCm39)	missense	not run
R8355:Or2y17	UTSW	11	49,231,592 (GRCm39)	missense	possibly damaging	0.89
R8497:Or2y17	UTSW	11	49,231,721 (GRCm39)	missense	probably damaging	1.00
R8715:Or2y17	UTSW	11	49,232,154 (GRCm39)	missense	probably damaging	1.00
R9587:Or2y17	UTSW	11	49,232,007 (GRCm39)	missense	probably benign	0.22

Predicted Primers

PCR Primer
(F):5'- GGACCAATGCTCTGTTCTGTGCTC -3'
(R):5'- AGTGGTTCAGTCGATGTCCACAAAG -3'

Sequencing Primer
(F):5'- GTTTCAATACGAGTTTTAGACAGGG -3'
(R):5'- CATCATGAGGCTCGTCTGAATTAG -3'

Posted On

2013-04-24