Incidental Mutation 'IGL00852:Spmip4'
ID 278029
Institutional Source Australian Phenomics Network (link to record)
Gene Symbol Spmip4
Ensembl Gene ENSMUSG00000029828
Gene Name sperm microtubule inner protein 4
Synonyms 4921507P07Rik
Accession Numbers
Essential gene? Probably non essential (E-score: 0.054) question?
Stock # IGL00852
Quality Score
Status
Chromosome 6
Chromosomal Location 50550282-50573612 bp(-) (GRCm39)
Type of Mutation critical splice acceptor site
DNA Base Change (assembly) T to A at 50566164 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000031852 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000031852] [ENSMUST00000031852]
AlphaFold no structure available at present
Predicted Effect probably null
Transcript: ENSMUST00000031852
SMART Domains Protein: ENSMUSP00000031852
Gene: ENSMUSG00000029828

DomainStartEndE-ValueType
Pfam:DUF4555 1 283 2e-149 PFAM
Predicted Effect probably null
Transcript: ENSMUST00000031852
SMART Domains Protein: ENSMUSP00000031852
Gene: ENSMUSG00000029828

DomainStartEndE-ValueType
Pfam:DUF4555 1 283 2e-149 PFAM
Predicted Effect noncoding transcript
Transcript: ENSMUST00000126537
Predicted Effect noncoding transcript
Transcript: ENSMUST00000147260
Coding Region Coverage
Validation Efficiency
Allele List at MGI
Other mutations in this stock
Total: 21 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Cfap157 T A 2: 32,669,827 (GRCm39) Q252L possibly damaging Het
Chd9 C A 8: 91,699,835 (GRCm39) Q622K probably benign Het
Crygd C T 1: 65,101,250 (GRCm39) R115Q probably benign Het
Cypt15-ps A T X: 38,435,507 (GRCm39) R56* probably null Het
Dbt G A 3: 116,339,763 (GRCm39) G384S probably benign Het
Dmxl2 A T 9: 54,330,597 (GRCm39) L721* probably null Het
Dsc2 C T 18: 20,167,740 (GRCm39) V718I probably benign Het
Eef1b2 G A 1: 63,217,665 (GRCm39) G91R probably damaging Het
Epb41l1 C T 2: 156,345,638 (GRCm39) L214F probably damaging Het
Ibtk A C 9: 85,595,654 (GRCm39) Y971D probably benign Het
Lancl1 G A 1: 67,043,996 (GRCm39) L335F probably damaging Het
Pcm1 T C 8: 41,740,858 (GRCm39) W1035R probably damaging Het
Pkn2 T A 3: 142,515,577 (GRCm39) probably benign Het
Ranbp2 G A 10: 58,313,723 (GRCm39) R1481Q probably benign Het
Scn5a T C 9: 119,366,748 (GRCm39) N313S probably benign Het
Septin10 A G 10: 59,028,642 (GRCm39) probably benign Het
Serpinb6c A T 13: 34,081,321 (GRCm39) probably null Het
Slc22a19 C T 19: 7,660,323 (GRCm39) M362I probably benign Het
Tnni3k T A 3: 154,760,206 (GRCm39) Q43L probably benign Het
Trpm3 T A 19: 22,964,435 (GRCm39) V1310D possibly damaging Het
Zdhhc13 T A 7: 48,455,349 (GRCm39) S260R probably benign Het
Other mutations in Spmip4
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01310:Spmip4 APN 6 50,551,175 (GRCm39) missense probably benign
IGL01568:Spmip4 APN 6 50,550,678 (GRCm39) utr 3 prime probably benign
IGL01794:Spmip4 APN 6 50,554,826 (GRCm39) missense probably damaging 1.00
IGL02718:Spmip4 APN 6 50,561,367 (GRCm39) missense probably damaging 1.00
IGL03146:Spmip4 APN 6 50,550,853 (GRCm39) missense probably damaging 0.97
IGL03381:Spmip4 APN 6 50,566,116 (GRCm39) missense probably damaging 1.00
R1173:Spmip4 UTSW 6 50,566,121 (GRCm39) missense probably damaging 0.98
R1174:Spmip4 UTSW 6 50,566,121 (GRCm39) missense probably damaging 0.98
R1175:Spmip4 UTSW 6 50,566,121 (GRCm39) missense probably damaging 0.98
R1769:Spmip4 UTSW 6 50,568,801 (GRCm39) splice site probably benign
R1883:Spmip4 UTSW 6 50,551,433 (GRCm39) missense probably benign 0.01
R2056:Spmip4 UTSW 6 50,550,725 (GRCm39) missense possibly damaging 0.71
R2437:Spmip4 UTSW 6 50,560,959 (GRCm39) missense probably damaging 1.00
R2929:Spmip4 UTSW 6 50,551,285 (GRCm39) missense probably benign 0.07
R4357:Spmip4 UTSW 6 50,551,190 (GRCm39) missense probably benign
R4666:Spmip4 UTSW 6 50,572,808 (GRCm39) missense possibly damaging 0.69
R4791:Spmip4 UTSW 6 50,572,817 (GRCm39) missense probably damaging 1.00
R4827:Spmip4 UTSW 6 50,572,836 (GRCm39) missense possibly damaging 0.76
R4976:Spmip4 UTSW 6 50,566,164 (GRCm39) critical splice acceptor site probably null
R5453:Spmip4 UTSW 6 50,572,776 (GRCm39) critical splice donor site probably null
R6689:Spmip4 UTSW 6 50,566,089 (GRCm39) critical splice donor site probably null
R6897:Spmip4 UTSW 6 50,566,145 (GRCm39) missense possibly damaging 0.82
R7718:Spmip4 UTSW 6 50,566,078 (GRCm39) splice site probably null
R8475:Spmip4 UTSW 6 50,566,107 (GRCm39) missense probably damaging 0.99
R8885:Spmip4 UTSW 6 50,551,028 (GRCm39) missense possibly damaging 0.95
R8975:Spmip4 UTSW 6 50,561,391 (GRCm39) missense probably damaging 1.00
R9626:Spmip4 UTSW 6 50,550,930 (GRCm39) missense
X0021:Spmip4 UTSW 6 50,550,906 (GRCm39) missense probably benign
Z1176:Spmip4 UTSW 6 50,551,001 (GRCm39) missense possibly damaging 0.55
Z1177:Spmip4 UTSW 6 50,568,672 (GRCm39) missense probably benign 0.17
Posted On 2015-04-16