Incidental Mutation 'R3618:Slc8a2'
ID 268515
Institutional Source Beutler Lab
Gene Symbol Slc8a2
Ensembl Gene ENSMUSG00000030376
Gene Name solute carrier family 8 (sodium/calcium exchanger), member 2
Synonyms Ncx2
MMRRC Submission 040675-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.132) question?
Stock # R3618 (G1)
Quality Score 225
Status Not validated
Chromosome 7
Chromosomal Location 15863751-15894988 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to G at 15886824 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Asparagine to Aspartic acid at position 656 (N656D)
Ref Sequence ENSEMBL: ENSMUSP00000147497 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000168693] [ENSMUST00000211649]
AlphaFold Q8K596
Predicted Effect probably benign
Transcript: ENSMUST00000168693
AA Change: N650D

PolyPhen 2 Score 0.212 (Sensitivity: 0.92; Specificity: 0.88)
SMART Domains Protein: ENSMUSP00000128926
Gene: ENSMUSG00000030376
AA Change: N650D

DomainStartEndE-ValueType
signal peptide 1 20 N/A INTRINSIC
low complexity region 23 32 N/A INTRINSIC
Pfam:Na_Ca_ex 74 245 8.6e-35 PFAM
Pfam:Na_Ca_ex_C 248 378 7.8e-50 PFAM
Calx_beta 383 483 3.27e-47 SMART
Calx_beta 512 612 3.37e-49 SMART
low complexity region 704 717 N/A INTRINSIC
Pfam:Na_Ca_ex 747 912 2.5e-27 PFAM
Predicted Effect possibly damaging
Transcript: ENSMUST00000211649
AA Change: N656D

PolyPhen 2 Score 0.480 (Sensitivity: 0.89; Specificity: 0.90)
Coding Region Coverage
  • 1x: 99.1%
  • 3x: 98.5%
  • 10x: 97.1%
  • 20x: 94.6%
Validation Efficiency
MGI Phenotype PHENOTYPE: The clearance of elevated calcium following depolarization is delayed in homozygous mutant mice, which exhibit enhanced learning and memory. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 38 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
1110002E22Rik A G 3: 137,774,168 (GRCm39) E1119G probably damaging Het
Ahnak2 A G 12: 112,749,842 (GRCm39) I132T probably damaging Het
Arhgap29 G A 3: 121,782,176 (GRCm39) D63N possibly damaging Het
Bsn T A 9: 107,994,760 (GRCm39) probably null Het
Cfap161 A C 7: 83,429,390 (GRCm39) Y209* probably null Het
Drp2 A C X: 133,340,717 (GRCm39) D458A probably benign Het
Efcab6 T C 15: 83,834,270 (GRCm39) H446R probably benign Het
Enpep G C 3: 129,077,807 (GRCm39) S603R possibly damaging Het
F13a1 G A 13: 37,127,967 (GRCm39) T337I probably damaging Het
Fhod3 TGAGGAGGAGGAGGAGGA TGAGGAGGAGGAGGA 18: 25,153,722 (GRCm39) probably benign Het
Hcfc1 A T X: 72,993,694 (GRCm39) V1157D probably benign Het
Inava A C 1: 136,142,110 (GRCm39) V663G probably benign Het
Ino80 T C 2: 119,277,353 (GRCm39) D374G probably null Het
Kif1a T C 1: 93,004,765 (GRCm39) E143G probably null Het
Larp1 A T 11: 57,948,172 (GRCm39) E990D probably benign Het
Larp7 C A 3: 127,330,614 (GRCm39) E568* probably null Het
Ltn1 A T 16: 87,217,787 (GRCm39) S298R probably damaging Het
Mcm10 A G 2: 5,001,913 (GRCm39) probably null Het
Mef2a G A 7: 66,918,075 (GRCm39) S111L probably benign Het
Mroh1 A G 15: 76,336,546 (GRCm39) T1590A possibly damaging Het
Ncoa6 A T 2: 155,249,709 (GRCm39) H1198Q possibly damaging Het
Ogg1 A G 6: 113,305,334 (GRCm39) E49G probably damaging Het
Palm3 T A 8: 84,755,973 (GRCm39) V495E probably benign Het
Pam A G 1: 97,762,157 (GRCm39) F809L probably damaging Het
Parp3 T C 9: 106,352,262 (GRCm39) E88G possibly damaging Het
Ptprs A G 17: 56,735,965 (GRCm39) I156T probably benign Het
Pus7l T A 15: 94,425,788 (GRCm39) I538F probably damaging Het
Rgs8 A G 1: 153,566,742 (GRCm39) T98A probably null Het
Ryr2 C T 13: 11,787,466 (GRCm39) probably null Het
Stard9 C T 2: 120,529,500 (GRCm39) T1919I possibly damaging Het
Tbcel T C 9: 42,372,591 (GRCm39) probably benign Het
Trpv3 A T 11: 73,186,281 (GRCm39) I691F probably damaging Het
Uba2 A G 7: 33,853,907 (GRCm39) probably null Het
Usp53 A C 3: 122,728,061 (GRCm39) S840R probably benign Het
Vmn2r100 A T 17: 19,743,692 (GRCm39) I452F probably benign Het
Zbtb48 A T 4: 152,110,484 (GRCm39) probably null Het
Zfp385b G A 2: 77,246,233 (GRCm39) P177S probably benign Het
Zfp42 T C 8: 43,748,938 (GRCm39) R188G possibly damaging Het
Other mutations in Slc8a2
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL01778:Slc8a2 APN 7 15,892,818 (GRCm39) missense probably damaging 1.00
IGL02097:Slc8a2 APN 7 15,891,081 (GRCm39) missense possibly damaging 0.88
IGL02744:Slc8a2 APN 7 15,878,954 (GRCm39) missense possibly damaging 0.91
PIT4402001:Slc8a2 UTSW 7 15,868,419 (GRCm39) missense probably damaging 1.00
PIT4515001:Slc8a2 UTSW 7 15,874,504 (GRCm39) missense possibly damaging 0.69
R0281:Slc8a2 UTSW 7 15,874,914 (GRCm39) missense probably benign
R0513:Slc8a2 UTSW 7 15,891,264 (GRCm39) missense probably damaging 1.00
R0811:Slc8a2 UTSW 7 15,875,039 (GRCm39) missense probably damaging 1.00
R0812:Slc8a2 UTSW 7 15,875,039 (GRCm39) missense probably damaging 1.00
R0940:Slc8a2 UTSW 7 15,878,887 (GRCm39) missense probably benign 0.04
R1167:Slc8a2 UTSW 7 15,891,312 (GRCm39) missense possibly damaging 0.58
R1508:Slc8a2 UTSW 7 15,874,522 (GRCm39) missense probably benign 0.00
R1655:Slc8a2 UTSW 7 15,875,060 (GRCm39) missense probably damaging 1.00
R1917:Slc8a2 UTSW 7 15,886,845 (GRCm39) missense probably benign 0.11
R1919:Slc8a2 UTSW 7 15,886,845 (GRCm39) missense probably benign 0.11
R2051:Slc8a2 UTSW 7 15,874,940 (GRCm39) missense probably damaging 1.00
R2083:Slc8a2 UTSW 7 15,868,440 (GRCm39) missense probably damaging 1.00
R2128:Slc8a2 UTSW 7 15,874,417 (GRCm39) splice site probably null
R2149:Slc8a2 UTSW 7 15,893,089 (GRCm39) missense probably damaging 1.00
R3437:Slc8a2 UTSW 7 15,892,810 (GRCm39) missense probably damaging 1.00
R4645:Slc8a2 UTSW 7 15,868,164 (GRCm39) missense probably damaging 1.00
R4741:Slc8a2 UTSW 7 15,868,233 (GRCm39) missense probably damaging 1.00
R4936:Slc8a2 UTSW 7 15,868,100 (GRCm39) nonsense probably null
R5071:Slc8a2 UTSW 7 15,884,508 (GRCm39) missense possibly damaging 0.84
R5072:Slc8a2 UTSW 7 15,884,508 (GRCm39) missense possibly damaging 0.84
R5074:Slc8a2 UTSW 7 15,884,508 (GRCm39) missense possibly damaging 0.84
R5150:Slc8a2 UTSW 7 15,879,101 (GRCm39) missense possibly damaging 0.74
R5358:Slc8a2 UTSW 7 15,891,228 (GRCm39) missense probably damaging 1.00
R5839:Slc8a2 UTSW 7 15,868,412 (GRCm39) missense probably damaging 1.00
R5957:Slc8a2 UTSW 7 15,879,209 (GRCm39) missense possibly damaging 0.90
R6273:Slc8a2 UTSW 7 15,879,259 (GRCm39) missense possibly damaging 0.94
R6363:Slc8a2 UTSW 7 15,867,970 (GRCm39) missense probably benign 0.00
R6881:Slc8a2 UTSW 7 15,891,282 (GRCm39) missense probably damaging 1.00
R7084:Slc8a2 UTSW 7 15,878,963 (GRCm39) missense probably benign 0.17
R7211:Slc8a2 UTSW 7 15,874,538 (GRCm39) missense possibly damaging 0.87
R7227:Slc8a2 UTSW 7 15,878,906 (GRCm39) missense possibly damaging 0.73
R7278:Slc8a2 UTSW 7 15,875,077 (GRCm39) missense probably damaging 1.00
R7380:Slc8a2 UTSW 7 15,868,278 (GRCm39) missense probably damaging 1.00
R8239:Slc8a2 UTSW 7 15,879,230 (GRCm39) missense probably benign 0.00
R8698:Slc8a2 UTSW 7 15,891,132 (GRCm39) missense probably damaging 1.00
R8926:Slc8a2 UTSW 7 15,868,194 (GRCm39) missense probably damaging 1.00
R9249:Slc8a2 UTSW 7 15,891,156 (GRCm39) missense probably damaging 1.00
R9483:Slc8a2 UTSW 7 15,886,780 (GRCm39) missense possibly damaging 0.95
R9530:Slc8a2 UTSW 7 15,879,269 (GRCm39) missense probably null 0.86
R9778:Slc8a2 UTSW 7 15,887,124 (GRCm39) missense probably damaging 1.00
Z1177:Slc8a2 UTSW 7 15,874,912 (GRCm39) missense probably benign 0.13
Predicted Primers PCR Primer
(F):5'- TAGAATTTCATGGGCCGAGGG -3'
(R):5'- ATTCCACAGTGCTGAAGCTG -3'

Sequencing Primer
(F):5'- TTAGAGGGAGCTGGACGAGTC -3'
(R):5'- ACAGTGCTGAAGCTGGACCC -3'
Posted On 2015-02-19