Incidental Mutation 'R3087:Vmn1r11'
ID 262864
Institutional Source Beutler Lab
Gene Symbol Vmn1r11
Ensembl Gene ENSMUSG00000115236
Gene Name vomeronasal 1 receptor 11
Synonyms V1rc3
MMRRC Submission 040576-MU
Accession Numbers
Essential gene? Probably non essential (E-score: 0.104) question?
Stock # R3087 (G1)
Quality Score 225
Status Validated
Chromosome 6
Chromosomal Location 57114338-57115237 bp(+) (GRCm39)
Type of Mutation missense
DNA Base Change (assembly) A to C at 57114691 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change Lysine to Asparagine at position 81 (K81N)
Ref Sequence ENSEMBL: ENSMUSP00000154621 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000071304] [ENSMUST00000176954] [ENSMUST00000226968] [ENSMUST00000228235]
AlphaFold Q3SXA2
Predicted Effect possibly damaging
Transcript: ENSMUST00000071304
AA Change: K118N

PolyPhen 2 Score 0.897 (Sensitivity: 0.82; Specificity: 0.94)
SMART Domains Protein: ENSMUSP00000071272
Gene: ENSMUSG00000115236
AA Change: K118N

DomainStartEndE-ValueType
Pfam:V1R 28 293 4.5e-56 PFAM
Predicted Effect possibly damaging
Transcript: ENSMUST00000176954
AA Change: K118N

PolyPhen 2 Score 0.897 (Sensitivity: 0.82; Specificity: 0.94)
SMART Domains Protein: ENSMUSP00000135192
Gene: ENSMUSG00000093635
AA Change: K118N

DomainStartEndE-ValueType
Pfam:V1R 28 293 9.7e-59 PFAM
Predicted Effect possibly damaging
Transcript: ENSMUST00000226968
AA Change: K118N

PolyPhen 2 Score 0.897 (Sensitivity: 0.82; Specificity: 0.94)
Predicted Effect possibly damaging
Transcript: ENSMUST00000228235
AA Change: K81N

PolyPhen 2 Score 0.939 (Sensitivity: 0.80; Specificity: 0.94)
Meta Mutation Damage Score 0.1795 question?
Coding Region Coverage
  • 1x: 99.1%
  • 3x: 98.5%
  • 10x: 97.1%
  • 20x: 94.6%
Validation Efficiency 97% (29/30)
Allele List at MGI
Other mutations in this stock
Total: 28 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
Aknad1 C T 3: 108,664,179 (GRCm39) Q381* probably null Het
Arhgef39 C T 4: 43,497,581 (GRCm39) probably null Het
Cblif A T 19: 11,737,737 (GRCm39) K383* probably null Het
Ccdc85a G T 11: 28,342,857 (GRCm39) C113* probably null Het
Cdc16 T C 8: 13,809,004 (GRCm39) Y19H probably damaging Het
Ces2e T A 8: 105,657,347 (GRCm39) M289K probably benign Het
Cyp2u1 G A 3: 131,096,676 (GRCm39) A34V probably benign Het
Dkk2 A C 3: 131,791,900 (GRCm39) N36T probably damaging Het
Fam222a A G 5: 114,750,015 (GRCm39) S404G probably damaging Het
Fbll1 A T 11: 35,689,017 (GRCm39) V82E probably damaging Het
Flt3 A G 5: 147,284,856 (GRCm39) S754P probably benign Het
Fmo5 T C 3: 97,549,011 (GRCm39) W220R probably damaging Het
Gm7275 A G 16: 47,894,098 (GRCm39) noncoding transcript Het
Gmeb2 G T 2: 180,897,433 (GRCm39) probably benign Het
Ifi44l T C 3: 151,468,494 (GRCm39) H12R unknown Het
Itsn2 T C 12: 4,716,303 (GRCm39) Y1021H probably damaging Het
Map4 T C 9: 109,882,257 (GRCm39) S374P possibly damaging Het
Map4k4 A T 1: 40,060,242 (GRCm39) probably null Het
Mast4 G T 13: 102,990,434 (GRCm39) probably benign Het
Mdfic T A 6: 15,799,668 (GRCm39) L265H probably damaging Het
Pabpc2 A G 18: 39,907,319 (GRCm39) I195V probably benign Het
Pramel25 A G 4: 143,520,416 (GRCm39) D56G probably benign Het
Prdm1 T C 10: 44,322,823 (GRCm39) Y224C probably damaging Het
Spidr T C 16: 15,786,483 (GRCm39) Y420C probably damaging Het
Tlr6 A T 5: 65,111,668 (GRCm39) M413K probably damaging Het
Ttn T A 2: 76,585,168 (GRCm39) I22042F probably damaging Het
Vmn2r107 G A 17: 20,580,607 (GRCm39) E515K probably benign Het
Vstm4 T C 14: 32,614,592 (GRCm39) V178A possibly damaging Het
Other mutations in Vmn1r11
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL02134:Vmn1r11 APN 6 57,115,022 (GRCm39) missense possibly damaging 0.66
IGL02141:Vmn1r11 APN 6 57,114,364 (GRCm39) nonsense probably null
IGL03147:Vmn1r11 UTSW 6 57,114,650 (GRCm39) missense probably damaging 0.98
R0908:Vmn1r11 UTSW 6 57,115,049 (GRCm39) missense probably damaging 1.00
R1185:Vmn1r11 UTSW 6 57,114,492 (GRCm39) missense possibly damaging 0.89
R1185:Vmn1r11 UTSW 6 57,114,492 (GRCm39) missense possibly damaging 0.89
R1185:Vmn1r11 UTSW 6 57,114,492 (GRCm39) missense possibly damaging 0.89
R1347:Vmn1r11 UTSW 6 57,114,963 (GRCm39) missense probably benign 0.23
R1347:Vmn1r11 UTSW 6 57,114,963 (GRCm39) missense probably benign 0.23
R1348:Vmn1r11 UTSW 6 57,114,963 (GRCm39) missense probably benign 0.23
R1349:Vmn1r11 UTSW 6 57,114,963 (GRCm39) missense probably benign 0.23
R1373:Vmn1r11 UTSW 6 57,114,963 (GRCm39) missense probably benign 0.23
R1497:Vmn1r11 UTSW 6 57,114,394 (GRCm39) missense probably damaging 1.00
R2147:Vmn1r11 UTSW 6 57,114,583 (GRCm39) missense probably benign 0.29
R2367:Vmn1r11 UTSW 6 57,114,416 (GRCm39) missense probably benign 0.00
R4445:Vmn1r11 UTSW 6 57,114,515 (GRCm39) missense probably benign 0.31
R4667:Vmn1r11 UTSW 6 57,114,483 (GRCm39) missense probably damaging 1.00
R4769:Vmn1r11 UTSW 6 57,114,597 (GRCm39) missense probably damaging 1.00
R5513:Vmn1r11 UTSW 6 57,114,617 (GRCm39) missense probably damaging 0.97
R5841:Vmn1r11 UTSW 6 57,114,787 (GRCm39) missense probably damaging 1.00
R6089:Vmn1r11 UTSW 6 57,114,645 (GRCm39) missense possibly damaging 0.95
R7155:Vmn1r11 UTSW 6 57,115,147 (GRCm39) missense probably benign 0.07
R7359:Vmn1r11 UTSW 6 57,115,184 (GRCm39) missense probably damaging 1.00
R8846:Vmn1r11 UTSW 6 57,114,807 (GRCm39) missense probably benign 0.19
R9222:Vmn1r11 UTSW 6 57,114,992 (GRCm39) missense possibly damaging 0.94
R9300:Vmn1r11 UTSW 6 57,114,872 (GRCm39) missense probably benign 0.00
R9517:Vmn1r11 UTSW 6 57,114,555 (GRCm39) missense possibly damaging 0.88
Predicted Primers PCR Primer
(F):5'- GCTGTTCTTCACTGCAGGAG -3'
(R):5'- CTTGTAATCAGCATGACTCCTACAAG -3'

Sequencing Primer
(F):5'- CTTCACTGCAGGAGATATTTTGC -3'
(R):5'- ACACATCTCTAGAGGTTGTTACTG -3'
Posted On 2015-02-05