Incidental Mutation 'R0411:Cd101'
ID 261877
Institutional Source Beutler Lab
Gene Symbol Cd101
Ensembl Gene ENSMUSG00000086564
Gene Name CD101 antigen
Synonyms LOC381460, Igsf2
MMRRC Submission 038613-MU
Accession Numbers
Essential gene? Non essential (E-score: 0.000) question?
Stock # R0411 (G1)
Quality Score 163
Status Not validated
Chromosome 3
Chromosomal Location 100900845-100936872 bp(-) (GRCm39)
Type of Mutation splice site (46 bp from exon)
DNA Base Change (assembly) A to T at 100925843 bp (GRCm39)
Zygosity Heterozygous
Amino Acid Change
Ref Sequence ENSEMBL: ENSMUSP00000126027 (fasta)
Gene Model predicted gene model for transcript(s): [ENSMUST00000147399] [ENSMUST00000167086]
AlphaFold A8E0Y8
Predicted Effect probably null
Transcript: ENSMUST00000147399
SMART Domains Protein: ENSMUSP00000116643
Gene: ENSMUSG00000086564

DomainStartEndE-ValueType
signal peptide 1 20 N/A INTRINSIC
IG 28 143 4.96e-8 SMART
IG 153 266 4.74e-5 SMART
IG_like 274 379 2.19e-1 SMART
IG 289 395 3.25e-3 SMART
IG 417 533 4.85e-11 SMART
IG 545 659 1.52e-3 SMART
IG 680 805 3.16e-1 SMART
IG_like 827 927 2.95e-1 SMART
IG 856 955 1.04e-1 SMART
transmembrane domain 971 993 N/A INTRINSIC
Predicted Effect probably null
Transcript: ENSMUST00000167086
SMART Domains Protein: ENSMUSP00000126027
Gene: ENSMUSG00000086564

DomainStartEndE-ValueType
IG 24 139 4.96e-8 SMART
IG 149 262 4.74e-5 SMART
IG_like 270 375 2.19e-1 SMART
IG 285 391 3.25e-3 SMART
IG 413 529 4.85e-11 SMART
IG 541 655 1.52e-3 SMART
IG 676 801 3.16e-1 SMART
IG_like 823 923 2.95e-1 SMART
IG 852 951 1.04e-1 SMART
transmembrane domain 967 989 N/A INTRINSIC
Coding Region Coverage
  • 1x: 99.3%
  • 3x: 98.6%
  • 10x: 97.1%
  • 20x: 95.0%
Validation Efficiency 97% (66/68)
MGI Phenotype PHENOTYPE: Mice homozygous for a knock-out allele exhibit reduced Gr-1+ cells. [provided by MGI curators]
Allele List at MGI
Other mutations in this stock
Total: 66 list
GeneRefVarChr/LocMutationPredicted EffectZygosity
0610040J01Rik A G 5: 64,053,834 (GRCm39) probably benign Het
6030469F06Rik A T 12: 31,234,730 (GRCm39) noncoding transcript Het
Acad11 T C 9: 103,993,495 (GRCm39) F541L probably damaging Het
Acin1 G T 14: 54,884,231 (GRCm39) R92S probably damaging Het
Appl1 A G 14: 26,662,213 (GRCm39) S490P probably benign Het
Aqp9 C A 9: 71,037,726 (GRCm39) V184L probably benign Het
Arih1 A T 9: 59,393,266 (GRCm39) I122N possibly damaging Het
Bmi1 T C 2: 18,687,983 (GRCm39) probably benign Het
Bmpr1a G A 14: 34,137,834 (GRCm39) T391I possibly damaging Het
Cacna1s A G 1: 136,041,041 (GRCm39) K1256E probably damaging Het
Cacng3 C T 7: 122,367,795 (GRCm39) P225L probably damaging Het
Cd55 A G 1: 130,390,294 (GRCm39) probably benign Het
Cenpe T C 3: 134,928,016 (GRCm39) I258T probably damaging Het
Cfap251 C T 5: 123,428,117 (GRCm39) T538M probably damaging Het
Cma2 A G 14: 56,211,135 (GRCm39) probably benign Het
Ddost T A 4: 138,036,964 (GRCm39) S176T probably benign Het
Ddx19b A T 8: 111,750,596 (GRCm39) probably null Het
Dmxl2 A G 9: 54,286,223 (GRCm39) I2681T probably damaging Het
Ern1 C T 11: 106,289,412 (GRCm39) E964K probably benign Het
Exoc1l G T 5: 76,648,334 (GRCm39) V47L possibly damaging Het
Galntl5 C T 5: 25,425,172 (GRCm39) R430C probably benign Het
Gga3 A G 11: 115,478,259 (GRCm39) L511P probably damaging Het
Gria2 C T 3: 80,618,165 (GRCm39) probably benign Het
Hmbs A T 9: 44,252,949 (GRCm39) L28* probably null Het
Iffo2 A G 4: 139,330,532 (GRCm39) E220G probably damaging Het
Ifi30 A G 8: 71,217,562 (GRCm39) probably benign Het
Irf2 T A 8: 47,299,096 (GRCm39) C297S probably benign Het
Izumo4 T C 10: 80,538,918 (GRCm39) Y94H probably damaging Het
Klhdc9 A G 1: 171,187,353 (GRCm39) V215A probably benign Het
Kmt2a T C 9: 44,731,261 (GRCm39) probably benign Het
Kmt2c A T 5: 25,580,955 (GRCm39) C513S probably damaging Het
Lyg1 A T 1: 37,988,977 (GRCm39) M81K possibly damaging Het
Maip1 T G 1: 57,454,852 (GRCm39) W279G probably damaging Het
Myo7a T C 7: 97,721,144 (GRCm39) T1263A probably benign Het
Naa15 T A 3: 51,373,060 (GRCm39) I701N possibly damaging Het
Ncoa3 A G 2: 165,910,463 (GRCm39) N1292S probably benign Het
Necab2 T A 8: 120,180,979 (GRCm39) probably benign Het
Nfatc1 T A 18: 80,741,257 (GRCm39) I234F possibly damaging Het
Olfm1 G A 2: 28,098,223 (GRCm39) R95K possibly damaging Het
Or10ag56 A G 2: 87,139,402 (GRCm39) T90A probably benign Het
Or10ak8 A T 4: 118,773,823 (GRCm39) N280K possibly damaging Het
Otoa T C 7: 120,755,750 (GRCm39) probably null Het
Padi4 GCTGCGTACCTCCAC GC 4: 140,475,760 (GRCm39) probably benign Het
Pard6g A G 18: 80,160,337 (GRCm39) D150G probably damaging Het
Pax5 A G 4: 44,609,783 (GRCm39) L215S probably damaging Het
Pja2 A T 17: 64,594,516 (GRCm39) probably benign Het
Plk4 T A 3: 40,765,654 (GRCm39) probably benign Het
Polr1a A T 6: 71,955,405 (GRCm39) H1687L possibly damaging Het
Ptcd2 G A 13: 99,479,899 (GRCm39) L41F probably damaging Het
Ropn1 T A 16: 34,490,334 (GRCm39) S62T probably benign Het
Setd1a T C 7: 127,395,223 (GRCm39) probably benign Het
Setdb1 T C 3: 95,234,997 (GRCm39) D902G probably damaging Het
Sik3 T A 9: 46,120,068 (GRCm39) L719Q probably damaging Het
Slc36a1 G T 11: 55,123,333 (GRCm39) V433F probably benign Het
Slc6a3 T C 13: 73,705,169 (GRCm39) V220A possibly damaging Het
Slc6a5 A T 7: 49,561,539 (GRCm39) R24W probably damaging Het
Smox G T 2: 131,362,564 (GRCm39) R281L probably benign Het
Sulf2 G T 2: 165,935,436 (GRCm39) H226N probably damaging Het
Syne2 C T 12: 76,106,358 (GRCm39) probably null Het
Tenm3 C T 8: 48,740,826 (GRCm39) S1210N possibly damaging Het
Tns1 A T 1: 73,964,920 (GRCm39) V1237E probably damaging Het
Trf C T 9: 103,094,700 (GRCm39) V92M probably damaging Het
Ttn A G 2: 76,539,717 (GRCm39) V34423A possibly damaging Het
Vmn2r118 A G 17: 55,918,021 (GRCm39) probably benign Het
Vmn2r19 A G 6: 123,286,703 (GRCm39) Y112C probably damaging Het
Zfp326 G T 5: 106,026,641 (GRCm39) A15S possibly damaging Het
Other mutations in Cd101
AlleleSourceChrCoordTypePredicted EffectPPH Score
IGL00958:Cd101 APN 3 100,911,018 (GRCm39) missense probably damaging 1.00
IGL01443:Cd101 APN 3 100,910,887 (GRCm39) missense probably benign
IGL02000:Cd101 APN 3 100,919,398 (GRCm39) missense probably benign 0.11
IGL02178:Cd101 APN 3 100,901,082 (GRCm39) missense probably damaging 1.00
IGL02224:Cd101 APN 3 100,924,318 (GRCm39) missense probably benign
IGL02450:Cd101 APN 3 100,901,054 (GRCm39) missense probably damaging 0.99
IGL02502:Cd101 APN 3 100,919,141 (GRCm39) missense probably damaging 0.99
IGL02536:Cd101 APN 3 100,910,913 (GRCm39) missense probably damaging 1.00
IGL02749:Cd101 APN 3 100,927,715 (GRCm39) missense probably damaging 1.00
IGL02818:Cd101 APN 3 100,919,245 (GRCm39) missense probably damaging 1.00
IGL02829:Cd101 APN 3 100,925,881 (GRCm39) splice site probably benign
IGL02902:Cd101 APN 3 100,926,310 (GRCm39) splice site probably benign
tax_day UTSW 3 100,911,021 (GRCm39) missense possibly damaging 0.86
R0069:Cd101 UTSW 3 100,915,533 (GRCm39) missense probably benign 0.08
R0069:Cd101 UTSW 3 100,915,533 (GRCm39) missense probably benign 0.08
R0486:Cd101 UTSW 3 100,915,408 (GRCm39) missense possibly damaging 0.94
R0556:Cd101 UTSW 3 100,927,970 (GRCm39) missense probably damaging 1.00
R0726:Cd101 UTSW 3 100,927,938 (GRCm39) missense possibly damaging 0.95
R0966:Cd101 UTSW 3 100,915,538 (GRCm39) missense probably benign 0.13
R1344:Cd101 UTSW 3 100,926,091 (GRCm39) nonsense probably null
R1418:Cd101 UTSW 3 100,926,091 (GRCm39) nonsense probably null
R1547:Cd101 UTSW 3 100,926,267 (GRCm39) missense possibly damaging 0.94
R1551:Cd101 UTSW 3 100,919,329 (GRCm39) missense probably damaging 0.99
R1845:Cd101 UTSW 3 100,936,764 (GRCm39) splice site probably null
R1919:Cd101 UTSW 3 100,926,233 (GRCm39) missense probably damaging 1.00
R1976:Cd101 UTSW 3 100,915,377 (GRCm39) missense probably damaging 0.96
R2260:Cd101 UTSW 3 100,924,261 (GRCm39) missense possibly damaging 0.82
R2679:Cd101 UTSW 3 100,901,079 (GRCm39) missense probably benign 0.00
R2873:Cd101 UTSW 3 100,911,164 (GRCm39) missense probably benign 0.00
R3606:Cd101 UTSW 3 100,927,913 (GRCm39) missense probably damaging 1.00
R4201:Cd101 UTSW 3 100,926,001 (GRCm39) missense probably damaging 1.00
R4202:Cd101 UTSW 3 100,926,001 (GRCm39) missense probably damaging 1.00
R4205:Cd101 UTSW 3 100,926,001 (GRCm39) missense probably damaging 1.00
R4349:Cd101 UTSW 3 100,920,630 (GRCm39) missense possibly damaging 0.93
R4574:Cd101 UTSW 3 100,920,469 (GRCm39) missense probably benign 0.02
R4601:Cd101 UTSW 3 100,901,204 (GRCm39) missense possibly damaging 0.84
R4820:Cd101 UTSW 3 100,929,471 (GRCm39) missense probably benign 0.01
R4910:Cd101 UTSW 3 100,901,205 (GRCm39) missense probably benign 0.13
R5014:Cd101 UTSW 3 100,911,139 (GRCm39) missense probably damaging 0.99
R5081:Cd101 UTSW 3 100,911,021 (GRCm39) missense possibly damaging 0.86
R5396:Cd101 UTSW 3 100,926,126 (GRCm39) missense probably damaging 1.00
R5425:Cd101 UTSW 3 100,926,002 (GRCm39) missense probably damaging 1.00
R6193:Cd101 UTSW 3 100,927,778 (GRCm39) missense probably damaging 1.00
R6210:Cd101 UTSW 3 100,925,959 (GRCm39) missense probably damaging 1.00
R6732:Cd101 UTSW 3 100,915,515 (GRCm39) missense probably benign 0.01
R6830:Cd101 UTSW 3 100,901,012 (GRCm39) missense probably benign 0.12
R6897:Cd101 UTSW 3 100,920,376 (GRCm39) missense probably damaging 1.00
R6940:Cd101 UTSW 3 100,911,018 (GRCm39) missense probably damaging 1.00
R7335:Cd101 UTSW 3 100,926,045 (GRCm39) missense probably benign 0.01
R7565:Cd101 UTSW 3 100,926,108 (GRCm39) missense probably benign 0.00
R7880:Cd101 UTSW 3 100,915,182 (GRCm39) missense probably benign 0.00
R8121:Cd101 UTSW 3 100,927,898 (GRCm39) missense probably damaging 1.00
R8233:Cd101 UTSW 3 100,900,989 (GRCm39) missense unknown
R8900:Cd101 UTSW 3 100,926,062 (GRCm39) missense probably benign 0.19
R8960:Cd101 UTSW 3 100,910,817 (GRCm39) missense probably benign 0.01
R9260:Cd101 UTSW 3 100,920,599 (GRCm39) missense probably benign 0.16
R9335:Cd101 UTSW 3 100,915,431 (GRCm39) missense probably benign 0.18
R9663:Cd101 UTSW 3 100,911,222 (GRCm39) missense probably benign 0.21
X0018:Cd101 UTSW 3 100,925,948 (GRCm39) missense possibly damaging 0.95
X0023:Cd101 UTSW 3 100,926,171 (GRCm39) missense probably benign
X0058:Cd101 UTSW 3 100,927,737 (GRCm39) missense probably damaging 1.00
Z1177:Cd101 UTSW 3 100,924,456 (GRCm39) missense probably benign 0.02
Z1177:Cd101 UTSW 3 100,919,232 (GRCm39) missense probably benign 0.03
Predicted Primers
Posted On 2015-02-04