Incidental Mutation 'IGL01938:Xrra1'
| ID |
180772 |
| Institutional Source |
Australian Phenomics Network
(link to record)
|
| Gene Symbol |
Xrra1
|
| Ensembl Gene |
ENSMUSG00000035211 |
| Gene Name |
X-ray radiation resistance associated 1 |
| Synonyms |
|
| Accession Numbers |
|
| Essential gene? |
Probably non essential
(E-score: 0.069)
|
| Stock # |
IGL01938
|
| Quality Score |
|
|
Status
|
|
| Chromosome |
7 |
| Chromosomal Location |
99508425-99567031 bp(+) (GRCm39) |
| Type of Mutation |
critical splice donor site (2 bp from exon) |
| DNA Base Change (assembly) |
T to C
at 99528676 bp (GRCm39)
|
| Zygosity |
Heterozygous |
| Amino Acid Change |
|
| Ref Sequence |
ENSEMBL: ENSMUSP00000147177
(fasta)
|
| Gene Model |
predicted gene model for transcript(s):
[ENSMUST00000036155]
[ENSMUST00000036155]
[ENSMUST00000207855]
[ENSMUST00000208354]
|
| AlphaFold |
Q3U3V8 |
| Predicted Effect |
probably null
Transcript: ENSMUST00000036155
|
| SMART Domains |
Protein: ENSMUSP00000035929
Gene: ENSMUSG00000035211
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
41 |
52 |
N/A |
INTRINSIC |
|
Blast:LRR
|
144 |
168 |
4e-6 |
BLAST |
|
LRR
|
191 |
214 |
2.02e-1 |
SMART |
|
LRR
|
232 |
253 |
1.67e2 |
SMART |
|
LRR
|
257 |
278 |
6.41e1 |
SMART |
|
LRR
|
371 |
398 |
4.09e1 |
SMART |
|
low complexity region
|
748 |
756 |
N/A |
INTRINSIC |
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000036155
|
| SMART Domains |
Protein: ENSMUSP00000035929
Gene: ENSMUSG00000035211
| Domain | Start | End | E-Value | Type |
|---|
|
low complexity region
|
41 |
52 |
N/A |
INTRINSIC |
|
Blast:LRR
|
144 |
168 |
4e-6 |
BLAST |
|
LRR
|
191 |
214 |
2.02e-1 |
SMART |
|
LRR
|
232 |
253 |
1.67e2 |
SMART |
|
LRR
|
257 |
278 |
6.41e1 |
SMART |
|
LRR
|
371 |
398 |
4.09e1 |
SMART |
|
low complexity region
|
748 |
756 |
N/A |
INTRINSIC |
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000207760
|
| Predicted Effect |
probably null
Transcript: ENSMUST00000207855
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000208321
|
| Predicted Effect |
probably benign
Transcript: ENSMUST00000208354
|
| Predicted Effect |
noncoding transcript
Transcript: ENSMUST00000208548
|
| Coding Region Coverage |
|
| Validation Efficiency |
|
| Allele List at MGI |
|
| Other mutations in this stock |
Total: 36 list
| Gene | Ref | Var | Chr/Loc | Mutation | Predicted Effect | Zygosity |
|---|
| 2310003L06Rik |
C |
T |
5: 88,119,567 (GRCm39) |
T108I |
probably damaging |
Het |
| Adam34 |
A |
G |
8: 44,104,053 (GRCm39) |
Y531H |
probably damaging |
Het |
| Arhgef10 |
T |
A |
8: 15,041,062 (GRCm39) |
N1077K |
probably benign |
Het |
| BC034090 |
G |
T |
1: 155,108,338 (GRCm39) |
|
probably null |
Het |
| Cachd1 |
A |
G |
4: 100,831,325 (GRCm39) |
I706V |
possibly damaging |
Het |
| Cebpz |
A |
T |
17: 79,242,390 (GRCm39) |
C421* |
probably null |
Het |
| Celsr3 |
T |
C |
9: 108,705,614 (GRCm39) |
V699A |
probably benign |
Het |
| Col5a1 |
A |
G |
2: 27,886,885 (GRCm39) |
N935S |
unknown |
Het |
| Dnah1 |
C |
T |
14: 31,005,844 (GRCm39) |
V2312I |
probably benign |
Het |
| Ebf3 |
T |
C |
7: 136,911,047 (GRCm39) |
T156A |
probably damaging |
Het |
| Ern1 |
A |
G |
11: 106,302,483 (GRCm39) |
V457A |
probably benign |
Het |
| Flii |
T |
C |
11: 60,605,942 (GRCm39) |
Y1177C |
probably damaging |
Het |
| Fryl |
T |
A |
5: 73,279,707 (GRCm39) |
K197M |
probably damaging |
Het |
| Glb1l3 |
A |
G |
9: 26,729,825 (GRCm39) |
F515S |
probably damaging |
Het |
| Gm10718 |
A |
T |
9: 3,025,118 (GRCm39) |
Y194F |
probably benign |
Het |
| Kif26b |
T |
C |
1: 178,743,603 (GRCm39) |
I1233T |
probably damaging |
Het |
| Kptn |
A |
G |
7: 15,858,714 (GRCm39) |
Y286C |
probably damaging |
Het |
| Lyst |
A |
G |
13: 13,812,009 (GRCm39) |
N807S |
possibly damaging |
Het |
| Mki67 |
C |
T |
7: 135,296,059 (GRCm39) |
V2992M |
probably benign |
Het |
| Myocd |
A |
G |
11: 65,077,914 (GRCm39) |
L627P |
probably damaging |
Het |
| Neto2 |
A |
G |
8: 86,417,484 (GRCm39) |
I40T |
probably benign |
Het |
| Niban1 |
A |
G |
1: 151,565,365 (GRCm39) |
T232A |
probably benign |
Het |
| Nipsnap1 |
C |
T |
11: 4,843,134 (GRCm39) |
H269Y |
probably benign |
Het |
| Nlrp4g |
G |
A |
9: 124,349,068 (GRCm38) |
|
noncoding transcript |
Het |
| Nup188 |
A |
T |
2: 30,219,371 (GRCm39) |
R862S |
probably benign |
Het |
| Or1e16 |
T |
A |
11: 73,286,471 (GRCm39) |
I126F |
probably damaging |
Het |
| Or4a80 |
G |
T |
2: 89,582,692 (GRCm39) |
A160D |
probably benign |
Het |
| Or6c33 |
T |
A |
10: 129,853,981 (GRCm39) |
Y250* |
probably null |
Het |
| Pde4c |
A |
T |
8: 71,202,027 (GRCm39) |
K549N |
probably damaging |
Het |
| Pkd1l3 |
A |
G |
8: 110,361,933 (GRCm39) |
T992A |
probably benign |
Het |
| Pramel32 |
A |
G |
4: 88,547,600 (GRCm39) |
S24P |
possibly damaging |
Het |
| Smyd2 |
A |
G |
1: 189,621,079 (GRCm39) |
V213A |
probably benign |
Het |
| Sult1c2 |
C |
T |
17: 54,138,954 (GRCm39) |
V208M |
probably damaging |
Het |
| Ush2a |
T |
C |
1: 188,530,042 (GRCm39) |
L3277P |
probably damaging |
Het |
| Wdr72 |
T |
C |
9: 74,056,056 (GRCm39) |
V304A |
probably benign |
Het |
| Zscan29 |
C |
T |
2: 120,996,690 (GRCm39) |
A344T |
probably benign |
Het |
|
| Other mutations in Xrra1 |
| Allele | Source | Chr | Coord | Type | Predicted Effect | PPH Score |
|---|
|
IGL01782:Xrra1
|
APN |
7 |
99,524,401 (GRCm39) |
missense |
possibly damaging |
0.76 |
|
IGL02064:Xrra1
|
APN |
7 |
99,563,411 (GRCm39) |
missense |
probably damaging |
1.00 |
|
IGL02286:Xrra1
|
APN |
7 |
99,563,434 (GRCm39) |
missense |
possibly damaging |
0.62 |
|
IGL02415:Xrra1
|
APN |
7 |
99,565,150 (GRCm39) |
missense |
probably benign |
|
|
R0332:Xrra1
|
UTSW |
7 |
99,525,449 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R0465:Xrra1
|
UTSW |
7 |
99,528,578 (GRCm39) |
missense |
probably benign |
0.00 |
|
R0533:Xrra1
|
UTSW |
7 |
99,524,352 (GRCm39) |
splice site |
probably null |
|
|
R0601:Xrra1
|
UTSW |
7 |
99,560,175 (GRCm39) |
missense |
possibly damaging |
0.95 |
|
R1539:Xrra1
|
UTSW |
7 |
99,520,564 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1672:Xrra1
|
UTSW |
7 |
99,547,647 (GRCm39) |
missense |
probably benign |
0.00 |
|
R1687:Xrra1
|
UTSW |
7 |
99,525,451 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R1962:Xrra1
|
UTSW |
7 |
99,560,227 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R2504:Xrra1
|
UTSW |
7 |
99,546,803 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R4765:Xrra1
|
UTSW |
7 |
99,555,775 (GRCm39) |
missense |
probably benign |
0.19 |
|
R4967:Xrra1
|
UTSW |
7 |
99,555,730 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R5213:Xrra1
|
UTSW |
7 |
99,547,690 (GRCm39) |
missense |
possibly damaging |
0.47 |
|
R5663:Xrra1
|
UTSW |
7 |
99,535,250 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R5986:Xrra1
|
UTSW |
7 |
99,525,462 (GRCm39) |
missense |
probably benign |
0.40 |
|
R6256:Xrra1
|
UTSW |
7 |
99,563,671 (GRCm39) |
missense |
probably damaging |
0.99 |
|
R6269:Xrra1
|
UTSW |
7 |
99,566,679 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R7234:Xrra1
|
UTSW |
7 |
99,563,456 (GRCm39) |
missense |
possibly damaging |
0.49 |
|
R7316:Xrra1
|
UTSW |
7 |
99,525,423 (GRCm39) |
critical splice acceptor site |
probably null |
|
|
R7655:Xrra1
|
UTSW |
7 |
99,560,189 (GRCm39) |
missense |
probably benign |
0.10 |
|
R7656:Xrra1
|
UTSW |
7 |
99,560,189 (GRCm39) |
missense |
probably benign |
0.10 |
|
R8688:Xrra1
|
UTSW |
7 |
99,555,752 (GRCm39) |
missense |
probably damaging |
1.00 |
|
R8788:Xrra1
|
UTSW |
7 |
99,555,761 (GRCm39) |
missense |
probably benign |
0.02 |
|
R9016:Xrra1
|
UTSW |
7 |
99,525,462 (GRCm39) |
missense |
probably benign |
0.11 |
|
R9196:Xrra1
|
UTSW |
7 |
99,563,699 (GRCm39) |
critical splice donor site |
probably null |
|
|
R9233:Xrra1
|
UTSW |
7 |
99,516,574 (GRCm39) |
missense |
probably benign |
|
|
R9545:Xrra1
|
UTSW |
7 |
99,535,334 (GRCm39) |
missense |
possibly damaging |
0.46 |
|
R9641:Xrra1
|
UTSW |
7 |
99,561,088 (GRCm39) |
missense |
probably benign |
0.05 |
|
R9742:Xrra1
|
UTSW |
7 |
99,563,660 (GRCm39) |
missense |
probably benign |
0.40 |
|
X0017:Xrra1
|
UTSW |
7 |
99,565,307 (GRCm39) |
missense |
probably damaging |
1.00 |
|
X0021:Xrra1
|
UTSW |
7 |
99,547,693 (GRCm39) |
missense |
possibly damaging |
0.63 |
|
| Posted On |
2014-05-07 |
Incidental Mutation